GLODAPv2_2016: Mapped Climatologies
Jens Daniel Müller
20 November, 2020
Last updated: 2020-11-20
Checks: 7 0
Knit directory: Cant_eMLR/
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Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-06-14_n_1462_cruise_259_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-07-30_n_1132_cruise_260_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-08-25_n_798_cruise_261_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-11-22_n_211_cruise_464_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-12-20_n_514_cruise_434_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-02-11_n_1024_cruise_341_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-03-14_n_196_cruise_69_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-06-07_n_44_cruise_448_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-06-28_n_52_cruise_449_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-08-03_n_187_cruise_450_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-10-09_n_33_cruise_409_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-11-24_n_251_cruise_465_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-01-07_n_120_cruise_466_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-05-17_n_107_cruise_467_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-05-31_n_338_cruise_461_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-06-23_n_381_cruise_46_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-09-05_n_89_cruise_468_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-10-14_n_33_cruise_410_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-01-20_n_186_cruise_472_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-05-22_n_433_cruise_24_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-10-14_n_26_cruise_411_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-10-16_n_380_cruise_437_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-10-26_n_605_cruise_82_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-06-15_n_1143_cruise_83_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-06-23_n_381_cruise_476_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-08-14_n_870_cruise_477_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-09-04_n_32_cruise_478_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-09-12_n_392_cruise_438_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-11-17_n_912_cruise_70_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-04-01_n_46_cruise_682_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-05-29_n_26_cruise_706_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-06-27_n_147_cruise_263_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-06-28_n_769_cruise_392_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-03-13_n_768_cruise_484_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-07-03_n_14_cruise_591_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-07-23_n_20_cruise_592_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-08-10_n_1153_cruise_56_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-09-07_n_2722_cruise_486_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-10-06_n_1055_cruise_264_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-10-10_n_102_cruise_633_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-11-03_n_976_cruise_265_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-11-19_n_1221_cruise_487_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-01-01_n_1682_cruise_488_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-01-23_n_13_cruise_593_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-04-06_n_61_cruise_489_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-04-22_n_913_cruise_695_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-04-29_n_59_cruise_556_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-05-22_n_202_cruise_167_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-05-26_n_10_cruise_463_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-06-20_n_14_cruise_594_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-06-22_n_806_cruise_393_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-07-12_n_63_cruise_595_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-07-20_n_3228_cruise_272_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-08-17_n_956_cruise_490_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-10-23_n_83_cruise_492_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-10-27_n_59_cruise_596_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-11-27_n_926_cruise_493_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-10_n_691_cruise_72_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-24_n_14_cruise_597_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-25_n_2240_cruise_350_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-25_n_59_cruise_558_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-03-08_n_67_cruise_494_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-04-28_n_60_cruise_559_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-05-25_n_890_cruise_683_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-05-30_n_242_cruise_168_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-06-11_n_1558_cruise_495_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-07-17_n_66_cruise_599_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-09-14_n_1837_cruise_266_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-09-21_n_499_cruise_666_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-09-30_n_178_cruise_496_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-10-25_n_69_cruise_600_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-12-08_n_2641_cruise_497_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-01-24_n_68_cruise_561_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-03-08_n_1719_cruise_306_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-04-25_n_38_cruise_562_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-06-04_n_587_cruise_25_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-06-16_n_1_cruise_602_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-06-21_n_968_cruise_498_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-07-11_n_37_cruise_603_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-10-26_n_68_cruise_604_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-01-23_n_85_cruise_564_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-02-28_n_1671_cruise_352_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-03-09_n_1058_cruise_501_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-04-11_n_1995_cruise_353_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-04-30_n_63_cruise_565_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-05-31_n_600_cruise_327_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-07-03_n_47_cruise_606_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-07-31_n_33_cruise_607_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-08-14_n_1209_cruise_502_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-09-16_n_478_cruise_667_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-09-18_n_299_cruise_503_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-10-30_n_1828_cruise_504_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-10-31_n_63_cruise_566_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-12-07_n_1654_cruise_505_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-01-08_n_551_cruise_74_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-01-16_n_3261_cruise_345_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-02-01_n_79_cruise_608_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-02-21_n_1640_cruise_354_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-03-02_n_996_cruise_385_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-03-15_n_927_cruise_19_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-04-06_n_841_cruise_75_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-04-28_n_57_cruise_568_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-05-28_n_416_cruise_171_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-06-22_n_868_cruise_394_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-10-21_n_363_cruise_506_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-01-07_n_345_cruise_674_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-02-16_n_672_cruise_675_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-02-27_n_1170_cruise_84_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-03-29_n_1063_cruise_676_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-04-17_n_3605_cruise_355_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-05-18_n_2663_cruise_507_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-05-23_n_317_cruise_172_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-07-12_n_145_cruise_635_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-08-02_n_127_cruise_26_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-11-10_n_319_cruise_63_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-11-18_n_158_cruise_1059_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-01-01_n_4235_cruise_273_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-01-25_n_932_cruise_699_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-03-30_n_2340_cruise_346_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-04-03_n_377_cruise_703_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-05-21_n_266_cruise_173_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-05-26_n_168_cruise_1085_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-06-19_n_842_cruise_395_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-06-26_n_157_cruise_1063_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-07-25_n_1356_cruise_609_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-08-19_n_88_cruise_1064_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-10-16_n_161_cruise_2028_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-11-15_n_87_cruise_2029_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-12-22_n_1297_cruise_20_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-01-17_n_108_cruise_1065_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-01-30_n_270_cruise_1087_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-02-18_n_121_cruise_1066_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-03-21_n_2140_cruise_295_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-05-18_n_516_cruise_174_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-06-25_n_250_cruise_1067_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-07-07_n_2466_cruise_517_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-10-08_n_887_cruise_347_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-10-26_n_214_cruise_2031_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-01-28_n_253_cruise_1090_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-02-06_n_591_cruise_1002_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-02-19_n_242_cruise_1069_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-04-03_n_1103_cruise_329_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-04-15_n_111_cruise_2033_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-05-01_n_1390_cruise_330_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-06-07_n_152_cruise_1029_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-06-26_n_388_cruise_1092_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-07-05_n_715_cruise_1031_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-07-20_n_793_cruise_1071_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-08-14_n_1250_cruise_518_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-11-10_n_191_cruise_1073_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-12-05_n_231_cruise_2071_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-12-12_n_118_cruise_1074_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-12-15_n_828_cruise_1050_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-01-23_n_896_cruise_1051_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-01-29_n_369_cruise_1093_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-02-19_n_221_cruise_1076_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-03-14_n_222_cruise_2072_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-05-02_n_2816_cruise_1035_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-05-06_n_298_cruise_2073_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-06-09_n_233_cruise_1078_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-07-24_n_678_cruise_1079_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-08-21_n_883_cruise_1096_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-09-02_n_2030_cruise_1041_.png
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Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-12-06_n_137_cruise_2074_.png
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Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-01-24_n_288_cruise_2075_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-02-22_n_253_cruise_2038_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-03-13_n_187_cruise_2076_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-04-18_n_2219_cruise_1036_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-04-29_n_78_cruise_2039_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-05-05_n_288_cruise_2077_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-05-18_n_272_cruise_2040_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-06-16_n_195_cruise_2078_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-07-08_n_374_cruise_1098_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-07-25_n_403_cruise_2041_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-08-03_n_1705_cruise_1053_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-08-10_n_726_cruise_1099_.png
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Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-11-24_n_82_cruise_2079_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2014-12-11_n_536_cruise_1004_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-01-19_n_65_cruise_2043_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-01-29_n_315_cruise_2080_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-02-14_n_234_cruise_2044_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-03-04_n_215_cruise_2081_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-03-25_n_17_cruise_1017_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-04-20_n_260_cruise_1103_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-04-20_n_96_cruise_2045_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-05-02_n_230_cruise_2083_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-05-04_n_874_cruise_1043_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-05-12_n_362_cruise_1027_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-05-17_n_141_cruise_2046_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-05-17_n_689_cruise_1011_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-06-09_n_1587_cruise_1044_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-06-13_n_281_cruise_2084_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-07-20_n_445_cruise_2047_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-08-12_n_2_cruise_1040_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-08-16_n_817_cruise_1100_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-11-05_n_135_cruise_2048_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2015-11-20_n_106_cruise_2086_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-01-03_n_661_cruise_1054_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-01-16_n_78_cruise_2049_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-01-25_n_287_cruise_2087_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-02-15_n_381_cruise_2050_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-03-01_n_1352_cruise_1046_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-03-04_n_230_cruise_2088_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-04-13_n_106_cruise_2051_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-05-04_n_307_cruise_2090_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-05-16_n_146_cruise_2052_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-05-31_n_2080_cruise_1020_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-06-16_n_263_cruise_2091_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-06-24_n_104_cruise_2053_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-07-04_n_833_cruise_2011_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-07-21_n_1102_cruise_1101_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-08-13_n_290_cruise_2054_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-09-25_n_160_cruise_2055_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-11-01_n_132_cruise_2092_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-11-20_n_103_cruise_2056_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2016-12-25_n_3975_cruise_1045_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-01-12_n_103_cruise_2093_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-01-30_n_368_cruise_2057_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-02-16_n_269_cruise_2094_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-02-19_n_428_cruise_1055_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-03-06_n_277_cruise_2058_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-04-16_n_274_cruise_2059_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-05-07_n_146_cruise_2060_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-05-11_n_696_cruise_2027_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-06-20_n_134_cruise_2061_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-07-09_n_1120_cruise_2096_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-08-13_n_224_cruise_2062_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-09-13_n_175_cruise_2097_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-11-16_n_134_cruise_2063_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2017-12-04_n_247_cruise_2098_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-01-24_n_308_cruise_2099_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-01-29_n_1274_cruise_2008_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-02-12_n_275_cruise_2064_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-03-07_n_249_cruise_2100_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-03-18_n_1814_cruise_2105_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-04-16_n_328_cruise_2065_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-05-07_n_148_cruise_2101_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-05-28_n_243_cruise_2066_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-06-22_n_510_cruise_2102_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-08-01_n_185_cruise_2067_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2018-10-09_n_158_cruise_2068_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2019-04-27_n_808_cruise_2013_.png
Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.
These are the previous versions of the repository in which changes were made to the R Markdown (analysis/read_GLODAPv2_2016_MappedClimatologies.Rmd) and HTML (docs/read_GLODAPv2_2016_MappedClimatologies.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.
| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | caca4af | jens-daniel-mueller | 2020-11-20 | rebuild with child setup document |
| html | 2116b56 | jens-daniel-mueller | 2020-11-18 | Build site. |
| html | 29a642d | jens-daniel-mueller | 2020-11-17 | Build site. |
| Rmd | 2087408 | jens-daniel-mueller | 2020-11-17 | avoid NA fill beyond bottom depth |
| html | 6e1bc47 | jens-daniel-mueller | 2020-11-17 | Build site. |
| Rmd | 486d9e1 | jens-daniel-mueller | 2020-11-17 | avoid NA fill beyond bottom depth |
| html | 41367c3 | jens-daniel-mueller | 2020-11-17 | Build site. |
| Rmd | 6d7a0d5 | jens-daniel-mueller | 2020-11-17 | filled NAs |
| html | fc70a34 | jens-daniel-mueller | 2020-11-10 | Build site. |
| html | b170b79 | jens-daniel-mueller | 2020-11-03 | Build site. |
| html | 411a35b | jens-daniel-mueller | 2020-10-02 | Build site. |
| html | 0d38979 | jens-daniel-mueller | 2020-10-01 | Build site. |
| html | 80e9b77 | jens-daniel-mueller | 2020-09-30 | Build site. |
| Rmd | 1794dc7 | jens-daniel-mueller | 2020-09-30 | added 3d globe vis |
| html | 4578cfa | jens-daniel-mueller | 2020-09-19 | Build site. |
| html | abe1788 | jens-daniel-mueller | 2020-09-19 | Build site. |
| Rmd | fd2de12 | jens-daniel-mueller | 2020-09-19 | plotted NA column inventory |
| html | d4fdb2f | jens-daniel-mueller | 2020-09-19 | Build site. |
| Rmd | 42dbf62 | jens-daniel-mueller | 2020-09-19 | plotted column NA |
| html | 2f85af8 | jens-daniel-mueller | 2020-09-19 | Build site. |
| Rmd | b4afd14 | jens-daniel-mueller | 2020-09-19 | plotted column NA |
| html | d59f716 | jens-daniel-mueller | 2020-09-18 | Build site. |
| html | f5a20ac | jens-daniel-mueller | 2020-09-17 | Build site. |
| html | cf64460 | jens-daniel-mueller | 2020-09-17 | Build site. |
| html | d43d9e2 | jens-daniel-mueller | 2020-09-16 | Build site. |
| html | 1f3319a | jens-daniel-mueller | 2020-09-16 | Build site. |
| html | da91d98 | jens-daniel-mueller | 2020-09-10 | Build site. |
| html | f6f30c0 | jens-daniel-mueller | 2020-09-10 | Build site. |
| Rmd | f74449b | jens-daniel-mueller | 2020-09-10 | global section plots added |
| html | 3e3cef5 | jens-daniel-mueller | 2020-09-10 | Build site. |
| Rmd | e093533 | jens-daniel-mueller | 2020-09-10 | global section plots added |
| html | a34a239 | jens-daniel-mueller | 2020-09-10 | Build site. |
| html | c3ffdfd | jens-daniel-mueller | 2020-09-08 | Build site. |
| Rmd | 04ee730 | jens-daniel-mueller | 2020-09-08 | rebuild after revision |
| html | 6550cb3 | jens-daniel-mueller | 2020-09-08 | Build site. |
| Rmd | a81b920 | jens-daniel-mueller | 2020-09-08 | applied spatial boundaries |
| html | a50f053 | jens-daniel-mueller | 2020-09-07 | Build site. |
| html | da445a6 | jens-daniel-mueller | 2020-09-04 | Build site. |
| html | fa11a74 | jens-daniel-mueller | 2020-09-02 | Build site. |
| html | 429aab3 | jens-daniel-mueller | 2020-09-01 | Build site. |
| html | f4216dd | jens-daniel-mueller | 2020-09-01 | Build site. |
| html | 13a76d5 | jens-daniel-mueller | 2020-08-28 | Build site. |
| html | 27404de | jens-daniel-mueller | 2020-08-27 | Build site. |
| html | 06c2578 | jens-daniel-mueller | 2020-08-27 | Build site. |
| Rmd | c54a7fc | jens-daniel-mueller | 2020-08-27 | updated plots |
| html | b6d0e6a | jens-daniel-mueller | 2020-08-27 | Build site. |
| html | f40e48b | jens-daniel-mueller | 2020-08-26 | Build site. |
| html | ec20f40 | jens-daniel-mueller | 2020-08-24 | Build site. |
| html | 5ffe187 | jens-daniel-mueller | 2020-08-20 | Build site. |
| html | 1064ef8 | jens-daniel-mueller | 2020-08-19 | Build site. |
| html | 29a537a | jens-daniel-mueller | 2020-08-18 | Build site. |
| Rmd | 7fb61d5 | jens-daniel-mueller | 2020-08-18 | rerun with all parameters in one file |
| html | a3b6b68 | jens-daniel-mueller | 2020-08-13 | Build site. |
| html | 00c2120 | jens-daniel-mueller | 2020-08-13 | Build site. |
| html | b43777a | jens-daniel-mueller | 2020-08-13 | Build site. |
| html | 0db5801 | jens-daniel-mueller | 2020-08-13 | Build site. |
| Rmd | df165f1 | jens-daniel-mueller | 2020-08-13 | sourced params, masks, functions |
| html | bf69270 | jens-daniel-mueller | 2020-08-13 | Build site. |
| html | 1176c9a | jens-daniel-mueller | 2020-08-12 | Build site. |
| html | 8b32ee1 | jens-daniel-mueller | 2020-08-12 | Build site. |
| Rmd | 092a504 | jens-daniel-mueller | 2020-08-12 | harmonized coordinates, labels, plots and basin mask |
| html | 426ac40 | jens-daniel-mueller | 2020-08-12 | Build site. |
| Rmd | c76d1ab | jens-daniel-mueller | 2020-08-12 | Show Ind ocean lon |
| html | 1bb24c5 | jens-daniel-mueller | 2020-08-12 | Build site. |
| Rmd | 109ef2a | jens-daniel-mueller | 2020-08-12 | quiet nc opening, print each parameter name |
| html | f76390c | jens-daniel-mueller | 2020-08-12 | Build site. |
| Rmd | 33a3d29 | jens-daniel-mueller | 2020-08-12 | Applied basin mask, updated plots and harmoized variable names |
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| html | 2d179e7 | jens-daniel-mueller | 2020-08-12 | Build site. |
| html | 5d33341 | jens-daniel-mueller | 2020-08-11 | Build site. |
| html | 8a010ca | jens-daniel-mueller | 2020-08-11 | Build site. |
| html | a01041a | jens-daniel-mueller | 2020-08-11 | Build site. |
| html | e18e59a | jens-daniel-mueller | 2020-08-10 | Build site. |
| html | 7d7900a | jens-daniel-mueller | 2020-08-07 | Build site. |
| html | 5382e24 | jens-daniel-mueller | 2020-07-31 | Build site. |
| Rmd | 7ed9e6d | jens-daniel-mueller | 2020-07-31 | text formating |
| html | f232972 | jens-daniel-mueller | 2020-07-31 | Build site. |
| Rmd | 2cd68a7 | jens-daniel-mueller | 2020-07-31 | separate criteria chunk and explanations added |
| html | 9dc5d7f | jens-daniel-mueller | 2020-07-29 | Build site. |
| html | 21524b4 | jens-daniel-mueller | 2020-07-29 | Build site. |
| html | 30db5de | jens-daniel-mueller | 2020-07-29 | Build site. |
| Rmd | 973c193 | jens-daniel-mueller | 2020-07-29 | formating |
| html | 2e2412d | jens-daniel-mueller | 2020-07-29 | Build site. |
| Rmd | a9fbf3a | jens-daniel-mueller | 2020-07-29 | formating |
| html | 2e08795 | jens-daniel-mueller | 2020-07-24 | Build site. |
| html | 556e6cc | jens-daniel-mueller | 2020-07-23 | Build site. |
| html | c1289a2 | jens-daniel-mueller | 2020-07-23 | Build site. |
| html | 2890e73 | jens-daniel-mueller | 2020-07-23 | Build site. |
| html | fdfa7b9 | jens-daniel-mueller | 2020-07-22 | Build site. |
| html | 23038c8 | jens-daniel-mueller | 2020-07-22 | Build site. |
| Rmd | 09b3ca8 | jens-daniel-mueller | 2020-07-22 | eding plain text, restructuring some code |
| html | bb9c002 | jens-daniel-mueller | 2020-07-21 | Build site. |
| Rmd | d2ed0f8 | jens-daniel-mueller | 2020-07-21 | harmonied lat lon labeling |
| html | a268ace | jens-daniel-mueller | 2020-07-21 | Build site. |
| Rmd | 48de3ae | jens-daniel-mueller | 2020-07-21 | added pacific section |
| html | ca73a98 | jens-daniel-mueller | 2020-07-21 | Build site. |
| Rmd | e6c4220 | jens-daniel-mueller | 2020-07-21 | added section plots atlantic ocean |
| html | a842785 | jens-daniel-mueller | 2020-07-21 | Build site. |
| Rmd | 16cb19e | jens-daniel-mueller | 2020-07-21 | added section plots atlantic ocean |
| html | 55d905d | jens-daniel-mueller | 2020-07-21 | Build site. |
| Rmd | 87cc2f4 | jens-daniel-mueller | 2020-07-21 | added section plots atlantic ocean |
| html | b557574 | jens-daniel-mueller | 2020-07-21 | Build site. |
| Rmd | f881ecf | jens-daniel-mueller | 2020-07-21 | added section plots atlantic ocean |
| html | ce60bed | jens-daniel-mueller | 2020-07-21 | Build site. |
| Rmd | f9548b0 | jens-daniel-mueller | 2020-07-21 | added section plots atlantik |
| html | 21eb4f3 | jens-daniel-mueller | 2020-07-21 | Build site. |
| Rmd | e3d90cd | jens-daniel-mueller | 2020-07-21 | added section plots atlantik |
| html | 97dbf5b | jens-daniel-mueller | 2020-07-21 | Build site. |
| Rmd | 5def7e8 | jens-daniel-mueller | 2020-07-21 | create csvs for each parameter |
| html | 22b588c | jens-daniel-mueller | 2020-07-18 | Build site. |
| Rmd | 87a4680 | jens-daniel-mueller | 2020-07-18 | added WOA blank script |
| html | b82f4ea | jens-daniel-mueller | 2020-07-17 | Build site. |
| Rmd | 93fd22b | jens-daniel-mueller | 2020-07-17 | cleaned maps |
| html | 0f483e4 | jens-daniel-mueller | 2020-07-17 | Build site. |
| Rmd | 81f9f3f | jens-daniel-mueller | 2020-07-17 | Plots for all Glodap mapped variables |
| html | 30e2e22 | jens-daniel-mueller | 2020-07-14 | Build site. |
| Rmd | a48c8f0 | jens-daniel-mueller | 2020-07-14 | Read plot netcdf woth tidync |
| html | fc4cf4c | jens-daniel-mueller | 2020-07-14 | Build site. |
| Rmd | c18812a | jens-daniel-mueller | 2020-07-14 | Read plot netcdf woth tidync |
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1 Libraries
Loading libraries specific to the the analysis performed in this section.
library(stars)2 Read source files
Data source: Globally mapped climatologies from Lauvset et al. (2016) downloaded in June 2020 from glodap.info.
Following files were used:
file_list <- list.files(path = "data/input/GLODAPv2_2016b_Mappedclimatologies", pattern = "*.nc")
print(file_list)[1] "GLODAPv2.2016b.Cant.nc" "GLODAPv2.2016b.NO3.nc"
[3] "GLODAPv2.2016b.oxygen.nc" "GLODAPv2.2016b.PO4.nc"
[5] "GLODAPv2.2016b.salinity.nc" "GLODAPv2.2016b.silicate.nc"
[7] "GLODAPv2.2016b.TAlk.nc" "GLODAPv2.2016b.TCO2.nc"
[9] "GLODAPv2.2016b.temperature.nc"3 Plot data and write csv
Below, subsets of the climatologies are plotted, which display for all relevant parameters:
- maps at depth levels
- concentration along global section
The global section path is indicated as white line in maps.
Please note that NA values in the climatologies were filled with neighbouring values on the longitudinal axis.
# file <- file_list[2]
for (file in file_list) {
clim <- read_stars(here::here("data/input/GLODAPv2_2016b_Mappedclimatologies",
file),
quiet = TRUE)
# extract parameter name
parameter <- str_split(file, pattern = "6b.", simplify = TRUE)[2]
parameter <- str_split(parameter, pattern = ".nc", simplify = TRUE)[1]
print(parameter)
# extract parameter
clim <- clim %>% select(all_of(parameter))
#convert to table
clim_tibble <- clim %>%
as_tibble()
# harmonize column names
clim_tibble <- clim_tibble %>%
rename(lat = y,
lon = x,
depth = depth_surface)
# join with basin mask and remove data outside basin mask
clim_tibble <- inner_join(clim_tibble, basinmask)
# determine bottomdepth
bottom_depth <- clim_tibble %>%
filter(!is.na(!!sym(parameter))) %>%
group_by(lon, lat) %>%
summarise(bottom_depth = max(depth)) %>%
ungroup()
map +
geom_raster(data = bottom_depth,
aes(lon, lat, fill = bottom_depth)) +
scale_fill_viridis_c(direction = -1) +
labs(title = parameter)
# remove data below bottom depth
clim_tibble <- left_join(clim_tibble, bottom_depth)
rm(bottom_depth)
clim_tibble <- clim_tibble %>%
filter(depth <= bottom_depth) %>%
select(-bottom_depth)
# fill NAs with closest value along longitude
clim_tibble <- clim_tibble %>%
group_by(lat, depth, basin, basin_AIP) %>%
arrange(lon) %>%
fill(!!sym(parameter), .direction = "downup") %>%
ungroup()
# # plot column NA inventory
#
# clim_tibble_grid <- clim_tibble %>%
# filter(!is.na(!!sym(parameter))) %>%
# group_by(lat, lon) %>%
# summarise(depth_max = max(depth)) %>%
# ungroup()
#
# clim_tibble_grid <- full_join(clim_tibble, clim_tibble_grid)
#
# clim_tibble_grid <- clim_tibble_grid %>%
# filter(depth <= depth_max) %>%
# select(-depth_max)
#
# clim_tibble_grid <- clim_tibble_grid %>%
# filter(is.na(!!sym(parameter)),
# depth <= parameters$inventory_depth) %>%
# count(lat, lon)
#
# # plot NA map
# print(
#
# map +
# geom_raster(data = clim_tibble_grid,
# aes(lon, lat, fill = n)) +
# scale_fill_viridis_c() +
# theme(axis.title = element_blank()) +
# labs(title = paste(parameter, "colum NA"))
#
# )
#
# rm(clim_tibble_grid)
# remove NAs
clim_tibble <- clim_tibble %>%
drop_na()
# plot maps
print(
map_climatology(clim_tibble,
parameter)
)
# plot sections
print(
section_global(clim_tibble,
parameter,
"GLODAPv2_2016_Mapped_Climatology")
)
# write csv file
clim_tibble %>%
write_csv(here::here("data/interim",
paste("GLODAPv2_2016_MappedClimatology",parameter,".csv", sep = "")))
}[1] "Cant"
[1] "NO3"
[1] "oxygen"
[1] "PO4"
[1] "salinity"
[1] "silicate"
[1] "TAlk"
[1] "TCO2"
[1] "temperature"
sessionInfo()R version 4.0.2 (2020-06-22)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 18363)
Matrix products: default
locale:
[1] LC_COLLATE=English_Germany.1252 LC_CTYPE=English_Germany.1252
[3] LC_MONETARY=English_Germany.1252 LC_NUMERIC=C
[5] LC_TIME=English_Germany.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] stars_0.4-3 sf_0.9-5 abind_1.4-5 metR_0.7.0
[5] scico_1.2.0 patchwork_1.0.1 collapse_1.3.2 forcats_0.5.0
[9] stringr_1.4.0 dplyr_1.0.0 purrr_0.3.4 readr_1.3.1
[13] tidyr_1.1.0 tibble_3.0.3 ggplot2_3.3.2 tidyverse_1.3.0
[17] workflowr_1.6.2
loaded via a namespace (and not attached):
[1] fs_1.4.2 lubridate_1.7.9 httr_1.4.2 rprojroot_1.3-2
[5] tools_4.0.2 backports_1.1.8 R6_2.4.1 KernSmooth_2.23-17
[9] DBI_1.1.0 colorspace_1.4-1 withr_2.2.0 tidyselect_1.1.0
[13] compiler_4.0.2 git2r_0.27.1 cli_2.0.2 rvest_0.3.6
[17] xml2_1.3.2 isoband_0.2.2 sandwich_2.5-1 labeling_0.3
[21] scales_1.1.1 checkmate_2.0.0 classInt_0.4-3 digest_0.6.25
[25] rmarkdown_2.3 pkgconfig_2.0.3 htmltools_0.5.0 dbplyr_1.4.4
[29] rlang_0.4.7 readxl_1.3.1 rstudioapi_0.11 generics_0.0.2
[33] farver_2.0.3 zoo_1.8-8 jsonlite_1.7.0 magrittr_1.5
[37] Formula_1.2-3 Matrix_1.2-18 Rcpp_1.0.5 munsell_0.5.0
[41] fansi_0.4.1 lifecycle_0.2.0 stringi_1.4.6 whisker_0.4
[45] yaml_2.2.1 grid_4.0.2 blob_1.2.1 parallel_4.0.2
[49] promises_1.1.1 crayon_1.3.4 lattice_0.20-41 haven_2.3.1
[53] hms_0.5.3 knitr_1.30 pillar_1.4.6 reprex_0.3.0
[57] glue_1.4.1 evaluate_0.14 data.table_1.13.0 modelr_0.1.8
[61] vctrs_0.3.2 httpuv_1.5.4 cellranger_1.1.0 gtable_0.3.0
[65] assertthat_0.2.1 xfun_0.16 lwgeom_0.2-5 xtable_1.8-4
[69] broom_0.7.0 e1071_1.7-3 lfe_2.8-5.1 later_1.1.0.1
[73] class_7.3-17 viridisLite_0.3.0 units_0.6-7 ellipsis_0.3.1
[77] here_0.1