World Ocean Atlas 2013 - D. Clement
Jens Daniel Müller
20 November, 2020
Last updated: 2020-11-20
Checks: 7 0
Knit directory: Cant_eMLR/
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Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-06-14_n_1462_cruise_259_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-07-30_n_1132_cruise_260_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-08-25_n_798_cruise_261_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-11-22_n_211_cruise_464_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1997-12-20_n_514_cruise_434_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-02-11_n_1024_cruise_341_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-03-14_n_196_cruise_69_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-06-07_n_44_cruise_448_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-06-28_n_52_cruise_449_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-08-03_n_187_cruise_450_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-10-09_n_33_cruise_409_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1998-11-24_n_251_cruise_465_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-01-07_n_120_cruise_466_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-05-17_n_107_cruise_467_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-05-31_n_338_cruise_461_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-06-23_n_381_cruise_46_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-09-05_n_89_cruise_468_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_1999-10-14_n_33_cruise_410_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-01-20_n_186_cruise_472_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-05-22_n_433_cruise_24_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-10-14_n_26_cruise_411_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-10-16_n_380_cruise_437_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2000-10-26_n_605_cruise_82_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-06-15_n_1143_cruise_83_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-06-23_n_381_cruise_476_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-08-14_n_870_cruise_477_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-09-04_n_32_cruise_478_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-09-12_n_392_cruise_438_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2001-11-17_n_912_cruise_70_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-04-01_n_46_cruise_682_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-05-29_n_26_cruise_706_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-06-27_n_147_cruise_263_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2002-06-28_n_769_cruise_392_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-03-13_n_768_cruise_484_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-07-03_n_14_cruise_591_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-07-23_n_20_cruise_592_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-08-10_n_1153_cruise_56_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-09-07_n_2722_cruise_486_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-10-06_n_1055_cruise_264_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-10-10_n_102_cruise_633_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-11-03_n_976_cruise_265_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2003-11-19_n_1221_cruise_487_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-01-01_n_1682_cruise_488_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-01-23_n_13_cruise_593_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-04-06_n_61_cruise_489_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-04-22_n_913_cruise_695_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-04-29_n_59_cruise_556_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-05-22_n_202_cruise_167_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-05-26_n_10_cruise_463_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-06-20_n_14_cruise_594_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-06-22_n_806_cruise_393_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-07-12_n_63_cruise_595_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-07-20_n_3228_cruise_272_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-08-17_n_956_cruise_490_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-10-23_n_83_cruise_492_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-10-27_n_59_cruise_596_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2004-11-27_n_926_cruise_493_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-10_n_691_cruise_72_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-24_n_14_cruise_597_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-25_n_2240_cruise_350_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-01-25_n_59_cruise_558_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-03-08_n_67_cruise_494_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-04-28_n_60_cruise_559_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-05-25_n_890_cruise_683_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-05-30_n_242_cruise_168_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-06-11_n_1558_cruise_495_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-07-17_n_66_cruise_599_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-09-14_n_1837_cruise_266_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-09-21_n_499_cruise_666_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-09-30_n_178_cruise_496_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-10-25_n_69_cruise_600_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2005-12-08_n_2641_cruise_497_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-01-24_n_68_cruise_561_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-03-08_n_1719_cruise_306_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-04-25_n_38_cruise_562_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-06-04_n_587_cruise_25_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-06-16_n_1_cruise_602_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-06-21_n_968_cruise_498_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-07-11_n_37_cruise_603_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2006-10-26_n_68_cruise_604_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-01-23_n_85_cruise_564_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-02-28_n_1671_cruise_352_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-03-09_n_1058_cruise_501_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-04-11_n_1995_cruise_353_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-04-30_n_63_cruise_565_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-05-31_n_600_cruise_327_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-07-03_n_47_cruise_606_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-07-31_n_33_cruise_607_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-08-14_n_1209_cruise_502_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-09-16_n_478_cruise_667_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-09-18_n_299_cruise_503_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-10-30_n_1828_cruise_504_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-10-31_n_63_cruise_566_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2007-12-07_n_1654_cruise_505_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-01-08_n_551_cruise_74_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-01-16_n_3261_cruise_345_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-02-01_n_79_cruise_608_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-02-21_n_1640_cruise_354_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-03-02_n_996_cruise_385_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-03-15_n_927_cruise_19_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-04-06_n_841_cruise_75_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-04-28_n_57_cruise_568_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-05-28_n_416_cruise_171_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-06-22_n_868_cruise_394_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2008-10-21_n_363_cruise_506_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-01-07_n_345_cruise_674_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-02-16_n_672_cruise_675_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-02-27_n_1170_cruise_84_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-03-29_n_1063_cruise_676_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-04-17_n_3605_cruise_355_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-05-18_n_2663_cruise_507_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-05-23_n_317_cruise_172_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-07-12_n_145_cruise_635_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-08-02_n_127_cruise_26_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-11-10_n_319_cruise_63_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2009-11-18_n_158_cruise_1059_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-01-01_n_4235_cruise_273_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-01-25_n_932_cruise_699_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-03-30_n_2340_cruise_346_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-04-03_n_377_cruise_703_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-05-21_n_266_cruise_173_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-05-26_n_168_cruise_1085_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-06-19_n_842_cruise_395_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-06-26_n_157_cruise_1063_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-07-25_n_1356_cruise_609_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-08-19_n_88_cruise_1064_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-10-16_n_161_cruise_2028_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-11-15_n_87_cruise_2029_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2010-12-22_n_1297_cruise_20_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-01-17_n_108_cruise_1065_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-01-30_n_270_cruise_1087_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-02-18_n_121_cruise_1066_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-03-21_n_2140_cruise_295_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-05-18_n_516_cruise_174_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-06-25_n_250_cruise_1067_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-07-07_n_2466_cruise_517_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-10-08_n_887_cruise_347_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2011-10-26_n_214_cruise_2031_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-01-28_n_253_cruise_1090_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-02-06_n_591_cruise_1002_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-02-19_n_242_cruise_1069_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-04-03_n_1103_cruise_329_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-04-15_n_111_cruise_2033_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-05-01_n_1390_cruise_330_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-06-07_n_152_cruise_1029_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-06-26_n_388_cruise_1092_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-07-05_n_715_cruise_1031_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-07-20_n_793_cruise_1071_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-08-14_n_1250_cruise_518_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-11-10_n_191_cruise_1073_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-12-05_n_231_cruise_2071_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-12-12_n_118_cruise_1074_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2012-12-15_n_828_cruise_1050_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-01-23_n_896_cruise_1051_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-01-29_n_369_cruise_1093_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-02-19_n_221_cruise_1076_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-03-14_n_222_cruise_2072_.png
Deleted: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-05-02_n_2816_cruise_1035_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-05-06_n_298_cruise_2073_.png
Modified: output/figure/eMLR/data_preparation/all_cruises_clean/GLODAP_cruise_date_2013-06-09_n_233_cruise_1078_.png
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1 Libraries
Loading libraries specific to the the analysis performed in this section.
library(tidync)2 Data source
Dominic Clement provided a netcdf file with the basin mask and neutral densities used in Clement and Gruber (2018), both derived from the World Ocean Atlas 2013.
3 Read ncdfs
nd_mask <- tidync(here::here("data/input/World_Ocean_Atlas_2013_Clement",
"nd_mask.nc"))
nd_mask_tibble <- nd_mask %>% hyper_tibble()
nd_mask_tibble <- nd_mask_tibble %>%
mutate(gamma = if_else(gamma == -999, NaN, gamma)) %>%
drop_na()
nd_mask_tibble <- nd_mask_tibble %>%
rename(lat = latitude,
lon = longitude) %>%
mutate(lon = if_else(lon < 20, lon + 360, lon))4 Apply basin mask
5 Plots
Below, following subsets of the climatologies are plotted for all relevant parameters:
- Horizontal planes at 0, 150, 500, 2000m
- Meridional sections at longitudes: 335.5, 190.5, 70.5
Section locations are indicated as white lines in maps.
5.1 Basin map
Follwoing basin mask is not further used in this project.
nd_mask_tibble %>%
filter(depth == 0) %>%
ggplot(aes(lon, lat, fill = as.factor(mask))) +
geom_raster() +
geom_vline(
xintercept = c(
parameters$lon_Atl_section,
parameters$lon_Pac_section,
parameters$lon_Ind_section
),
col = "white"
) +
coord_quickmap(expand = 0) +
scale_fill_brewer(palette = "Set1",
name = "basin mask") +
theme(legend.position = "top",
axis.title = element_blank())
5.2 Neutral density
5.2.1 Maps
map_climatology(nd_mask_tibble, "gamma")
5.2.2 Sections
section_global(nd_mask_tibble, "gamma", "WOA13")
5.3 Write file
nd_mask_tibble %>%
write_csv(here::here("data/World_Ocean_Atlas_2013_Clement/_summarized_files",
"WOA13_mask_gamma.csv"))
sessionInfo()R version 4.0.2 (2020-06-22)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 18363)
Matrix products: default
locale:
[1] LC_COLLATE=English_Germany.1252 LC_CTYPE=English_Germany.1252
[3] LC_MONETARY=English_Germany.1252 LC_NUMERIC=C
[5] LC_TIME=English_Germany.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] tidync_0.2.4 metR_0.7.0 scico_1.2.0 patchwork_1.0.1
[5] collapse_1.3.2 forcats_0.5.0 stringr_1.4.0 dplyr_1.0.0
[9] purrr_0.3.4 readr_1.3.1 tidyr_1.1.0 tibble_3.0.3
[13] ggplot2_3.3.2 tidyverse_1.3.0 workflowr_1.6.2
loaded via a namespace (and not attached):
[1] httr_1.4.2 viridisLite_0.3.0 jsonlite_1.7.0 here_0.1
[5] modelr_0.1.8 Formula_1.2-3 assertthat_0.2.1 blob_1.2.1
[9] cellranger_1.1.0 yaml_2.2.1 pillar_1.4.6 backports_1.1.8
[13] lattice_0.20-41 glue_1.4.1 digest_0.6.25 RColorBrewer_1.1-2
[17] promises_1.1.1 checkmate_2.0.0 rvest_0.3.6 colorspace_1.4-1
[21] sandwich_2.5-1 htmltools_0.5.0 httpuv_1.5.4 Matrix_1.2-18
[25] pkgconfig_2.0.3 broom_0.7.0 haven_2.3.1 xtable_1.8-4
[29] scales_1.1.1 whisker_0.4 later_1.1.0.1 git2r_0.27.1
[33] farver_2.0.3 generics_0.0.2 ellipsis_0.3.1 withr_2.2.0
[37] cli_2.0.2 magrittr_1.5 crayon_1.3.4 readxl_1.3.1
[41] evaluate_0.14 ncdf4_1.17 fs_1.4.2 fansi_0.4.1
[45] xml2_1.3.2 tools_4.0.2 data.table_1.13.0 hms_0.5.3
[49] lifecycle_0.2.0 munsell_0.5.0 reprex_0.3.0 isoband_0.2.2
[53] compiler_4.0.2 lfe_2.8-5.1 RNetCDF_2.3-1 rlang_0.4.7
[57] grid_4.0.2 rstudioapi_0.11 labeling_0.3 rmarkdown_2.3
[61] gtable_0.3.0 DBI_1.1.0 R6_2.4.1 ncmeta_0.2.5
[65] zoo_1.8-8 lubridate_1.7.9 knitr_1.30 rprojroot_1.3-2
[69] stringi_1.4.6 parallel_4.0.2 Rcpp_1.0.5 vctrs_0.3.2
[73] dbplyr_1.4.4 tidyselect_1.1.0 xfun_0.16