Last updated: 2023-07-11
Checks: 2 0
Knit directory: dgrp-starve/
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Ignored files:
Ignored: code/snake/
Ignored: data/snake/
Ignored: junk/
Ignored: notes/
Untracked files:
Untracked: .snakemake/
Untracked: Rplot.pdf
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Unstaged changes:
Modified: .Rprofile
Modified: .gitattributes
Modified: .gitignore
Modified: README.md
Modified: _workflowr.yml
Modified: analysis/_site.yml
Modified: analysis/about.Rmd
Deleted: analysis/gremlo.R
Modified: analysis/license.Rmd
Modified: analysis/linReg.Rmd
Deleted: analysis/methodComp-f.Rmd
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Modified: analysis/methodComp.Rmd
Modified: analysis/methodPred.Rmd
Modified: analysis/multiComp.Rmd
Modified: analysis/multiReg.Rmd
Modified: analysis/pca.Rmd
Modified: analysis/predict.Rmd
Modified: analysis/recap.Rmd
Modified: analysis/rewrite.Rmd
Modified: analysis/starve.Rmd
Deleted: analysis/stepwise-f.Rmd
Deleted: analysis/stepwise-m.Rmd
Deleted: analysis/testing.R
Deleted: analysis/tips.Rmd
Modified: analysis/top3.Rmd
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Modified: code/README.md
Deleted: code/baseScript-lineComp.R
Deleted: code/combineSNP.R
Deleted: code/four-comp.76979.err
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Deleted: code/four-comp.sbatch
Deleted: code/fourLinePrep.R
Deleted: code/line_avgMinus.R
Deleted: code/line_avgPlus.R
Deleted: code/line_difMinus.R
Deleted: code/line_difPlus.R
Deleted: code/snpGene.R
Deleted: code/starveDataPrep.R
Modified: data/README.md
Modified: data/avgMinus-result.txt
Modified: data/avgMinus.txt
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Modified: data/difMinus-result.txt
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Modified: data/difPlus-result.txt
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Modified: data/geneHits.txt
Modified: data/snpList.txt
Modified: data/starve.csv
Modified: dgrp-starve.Rproj
Modified: output/README.md
Modified: output/avgMinus-result.txt
Modified: output/avgPlus-result.txt
Modified: output/difMinus-result.txt
Modified: output/difPlus-result.txt
Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.
These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd
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File | Version | Author | Date | Message |
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Rmd | 64bb8ec | nklimko | 2023-07-11 | fix index |
html | 17fdf0f | nklimko | 2023-06-20 | Build site. |
html | 790a201 | nklimko | 2023-05-30 | Build site. |
Rmd | 19e444b | nklimko | 2023-05-30 | wflow_publish(“analysis/index.Rmd”) |
html | 1eea604 | nklimko | 2023-04-10 | Build site. |
Rmd | d075224 | nklimko | 2023-04-10 | wflow_publish(“analysis/index.Rmd”) |
html | 50b5899 | nklimko | 2023-03-05 | Build site. |
Rmd | 6d91368 | nklimko | 2023-03-05 | wflow_publish(“analysis/index.Rmd”) |
html | 3d4bedc | nklimko | 2023-01-22 | Build site. |
Rmd | 3277dc5 | nklimko | 2023-01-22 | wflow_publish(“analysis/index.Rmd”) |
html | 64c9c72 | nklimko | 2023-01-10 | Build site. |
Rmd | 8b91e57 | nklimko | 2023-01-10 | wflow_publish(“analysis/index.Rmd”) |
html | 94ee8ea | nklimko | 2023-01-10 | Build site. |
Rmd | fb9edde | nklimko | 2023-01-10 | wflow_publish(“analysis/index.Rmd”) |
html | 036d3cc | nklimko | 2023-01-10 | Build site. |
Rmd | b2c1969 | nklimko | 2023-01-10 | wflow_publish(“analysis/index.Rmd”) |
html | 736d53e | nklimko | 2023-01-10 | Build site. |
Rmd | 5cc6e18 | nklimko | 2023-01-10 | wflow_publish("analysis/*") |
html | 9e86f56 | nklimko | 2023-01-08 | Build site. |
Rmd | 951799a | nklimko | 2023-01-08 | wflow_publish("analysis/*") |
html | 3751eb8 | nklimko | 2022-12-14 | Build site. |
html | 88ee9ec | nklimko | 2022-11-29 | Build site. |
html | 37278c9 | nklimko | 2022-11-22 | Build site. |
html | f09779e | nklimko | 2022-11-22 | Build site. |
html | f1d6437 | nklimko | 2022-11-15 | Build site. |
html | 79e98ca | nklimko | 2022-11-15 | Build site. |
html | d23d7f7 | nklimko | 2022-11-11 | Build site. |
Rmd | 3a282f1 | nklimko | 2022-11-11 | wflow_publish("analysis/*") |
html | 0ce7be4 | nklimko | 2022-11-10 | code sync |
Rmd | b90e540 | nklimko | 2022-11-09 | wflow_git_commit(all = TRUE) |
html | b90e540 | nklimko | 2022-11-09 | wflow_git_commit(all = TRUE) |
html | 81037cc | nklimko | 2022-11-09 | html reworking, snp success |
html | e9314ce | nklimko | 2022-11-05 | wflow_git_commit(all = TRUE) |
Rmd | 3dab5a8 | nklimko | 2022-11-01 | all files for me |
html | 3dab5a8 | nklimko | 2022-11-01 | all files for me |