Last updated: 2019-09-04
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Knit directory: apaQTL/analysis/
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Unstaged changes:
Modified: analysis/NuclearSpecAPAqtl.Rmd
Modified: analysis/PrematureTermQTL.Rmd
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Rmd | dc8d012 | brimittleman | 2019-06-14 | add nuclear specific analysis |
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Rmd | 90e0c4d | brimittleman | 2019-05-15 | add reg heatmap |
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Rmd | 77ca26a | brimittleman | 2019-05-14 | results by logef |
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Rmd | 5e39f1c | brimittleman | 2019-05-08 | choose pcs and start qtl rerun |
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Rmd | 24c2ceb | brimittleman | 2019-05-02 | add diff iso |
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Rmd | f9b8195 | brimittleman | 2019-04-30 | understand usage of new pas |
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Rmd | 27b11e3 | brimittleman | 2019-04-23 | start signal site analysis |
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Rmd | 851c963 | brimittleman | 2019-04-22 | add reads against feature |
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Rmd | 017f5c0 | brimittleman | 2019-04-18 | add map apa qtl pipeline |
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Rmd | 057dc1a | brimittleman | 2019-04-17 | add bam 2 pas analysis |
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Rmd | f5e23f3 | brimittleman | 2019-04-11 | add fastq 2 bam |
html | 444f1c7 | brimittleman | 2019-04-11 | Build site. |
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Rmd | 0f343f8 | brimittleman | 2019-04-11 | Start workflowr project. |
Welcome to my research website.
In the preprocessing steps of the analysis I will go from the fastq files that come off the sequencer to the PAS I will use for the rest of the analysis.
These files create some of the QC metrics I used for the analysis.