Last updated: 2023-10-05
Checks: 2 0
Knit directory: muse/
This reproducible R Markdown analysis was created with workflowr (version 1.7.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.
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Ignored files:
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Ignored: r_packages_4.3.0/
Untracked files:
Untracked: analysis/cell_ranger.Rmd
Untracked: analysis/complex_heatmap.Rmd
Untracked: analysis/sleuth.Rmd
Untracked: analysis/tss_xgboost.Rmd
Untracked: code/multiz100way/
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Untracked: women.json
Unstaged changes:
Modified: analysis/graph.Rmd
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These are the previous versions of the repository in which changes were
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) and HTML
(docs/index.html
) files. If you’ve configured a remote Git
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in the table below to view the files as they were in that past version.
File | Version | Author | Date | Message |
---|---|---|---|---|
Rmd | a63df84 | Dave Tang | 2023-10-05 | Ordering objects using seriation |
html | 5f5ccc4 | Dave Tang | 2023-09-06 | Build site. |
Rmd | e02b689 | Dave Tang | 2023-09-06 | Set notation |
html | 5cdedf4 | Dave Tang | 2023-08-01 | Build site. |
Rmd | b29e9ec | Dave Tang | 2023-08-01 | Object-Oriented Programming |
html | ccc5fa4 | Dave Tang | 2023-07-26 | Build site. |
Rmd | b5c3509 | Dave Tang | 2023-07-26 | Read list of files |
html | a36c3f2 | Dave Tang | 2023-07-26 | Build site. |
Rmd | c9869c6 | Dave Tang | 2023-07-26 | Link to davetang.org/muse |
html | 3e572d6 | Dave Tang | 2023-07-26 | Build site. |
Rmd | bd5654d | Dave Tang | 2023-07-26 | Convert wide and long data |
html | f706b10 | Dave Tang | 2023-07-21 | Build site. |
Rmd | e5a16af | Dave Tang | 2023-07-21 | HDF5 |
html | c019f75 | Dave Tang | 2023-07-13 | Build site. |
Rmd | e9ca6f1 | Dave Tang | 2023-07-13 | Update index |
html | 8090882 | Dave Tang | 2023-06-29 | Build site. |
Rmd | a3c61e8 | Dave Tang | 2023-06-29 | Hidden Markov Models |
html | 76621f1 | Dave Tang | 2023-06-28 | Build site. |
Rmd | d944430 | Dave Tang | 2023-06-28 | Position weight matrix |
html | b707032 | Dave Tang | 2023-06-26 | Build site. |
Rmd | 9161c86 | Dave Tang | 2023-06-26 | Learning about antibodies |
html | f8fc2f2 | Dave Tang | 2023-06-02 | Build site. |
Rmd | 140c2a0 | Dave Tang | 2023-06-02 | Update post |
html | 27ea248 | Dave Tang | 2023-05-30 | Build site. |
Rmd | 7432d2f | Dave Tang | 2023-05-30 | Parsing irregular formats |
html | 3bb3245 | Dave Tang | 2023-05-19 | Build site. |
Rmd | 50c92d7 | Dave Tang | 2023-05-19 | JSON and YAML formats |
html | e1a9ff4 | Dave Tang | 2023-03-10 | Build site. |
Rmd | beec955 | Dave Tang | 2023-03-10 | Fix link |
html | dbaa54d | Dave Tang | 2023-03-10 | Build site. |
Rmd | 4df0a4b | Dave Tang | 2023-03-10 | Performance of binary classifiers |
html | eac5905 | Dave Tang | 2023-02-13 | Build site. |
Rmd | 28276f9 | Dave Tang | 2023-02-13 | Using ensembldb |
html | 0a435d1 | Dave Tang | 2023-02-13 | Build site. |
Rmd | 1242888 | Dave Tang | 2023-02-13 | GenomicRanges |
html | 0b4b03d | Dave Tang | 2023-02-09 | Build site. |
Rmd | fdf7aee | Dave Tang | 2023-02-09 | Hyperlink typo |
html | 49d4629 | Dave Tang | 2023-02-09 | Build site. |
Rmd | 0c22d6a | Dave Tang | 2023-02-09 | Solving problems with graphs |
html | b82b4fc | Dave Tang | 2023-02-01 | Build site. |
Rmd | fb91538 | Dave Tang | 2023-02-01 | fgsea example data |
html | add50fe | Dave Tang | 2022-12-12 | Build site. |
Rmd | 419613a | Dave Tang | 2022-12-12 | Tidymodels |
html | 130d11f | Dave Tang | 2022-11-17 | Build site. |
Rmd | b2043f3 | Dave Tang | 2022-11-17 | Parallel computation in R |
html | 7a6571a | Dave Tang | 2022-11-04 | Build site. |
Rmd | 6def24c | Dave Tang | 2022-11-04 | Adjacency list |
html | 6bbf281 | Dave Tang | 2022-10-20 | Build site. |
Rmd | f9bfcec | Dave Tang | 2022-10-20 | PCA |
html | 8107082 | Dave Tang | 2022-09-07 | Build site. |
Rmd | 0a02109 | Dave Tang | 2022-09-07 | Backticks in R |
html | b814eb1 | Dave Tang | 2022-04-28 | Build site. |
Rmd | 9b739a1 | Dave Tang | 2022-04-28 | Using the seqinr package |
html | b743be8 | Dave Tang | 2022-04-26 | Build site. |
Rmd | 9ae1c27 | Dave Tang | 2022-04-26 | Aggregation with dplyr |
html | 1229a49 | Dave Tang | 2022-04-22 | Build site. |
Rmd | 8e4bd29 | Dave Tang | 2022-04-22 | Fix bullet point |
html | fd41c75 | Dave Tang | 2022-04-22 | Build site. |
Rmd | e372c81 | Dave Tang | 2022-04-22 | TSS |
html | d334dbd | Dave Tang | 2022-04-14 | Build site. |
Rmd | a9f5e22 | Dave Tang | 2022-04-14 | Distance metrics |
html | d6644d2 | Dave Tang | 2021-06-22 | Build site. |
Rmd | 8ae8e21 | Dave Tang | 2021-06-22 | Post on splitting a single column of annotations |
html | 1cd1577 | davetang | 2021-01-27 | Build site. |
Rmd | 687a6ca | davetang | 2021-01-27 | Gene Ontology Enrichment Analysis |
html | 6ef7a62 | davetang | 2020-12-01 | Build site. |
Rmd | acb1733 | davetang | 2020-12-01 | Read GTF files into R |
html | e8c8661 | davetang | 2020-11-15 | Build site. |
Rmd | ab3533f | davetang | 2020-11-15 | Fix link |
html | 5dc50c6 | davetang | 2020-11-15 | Build site. |
Rmd | 9639627 | davetang | 2020-11-15 | Complex UpSet plots |
html | 2db13ea | davetang | 2020-11-10 | Build site. |
Rmd | 268312f | davetang | 2020-11-10 | wflow_publish(files = c("analysis/index.Rmd", "analysis/google_trends.Rmd", |
html | 03f05e8 | davetang | 2020-10-18 | Build site. |
Rmd | f79342a | davetang | 2020-10-18 | Markov chain post |
html | 586b91f | Dave Tang | 2020-07-12 | Build site. |
Rmd | b1d6edd | Dave Tang | 2020-07-12 | pheatmap |
Rmd | b3f3dc1 | Dave Tang | 2020-07-12 | Start workflowr project. |
I refer to my blog often to
look up notes and code I have written. I will recreate my blog posts
here, to make it easier to reuse and also maintain my code. Some posts
only exist here and not on my blog, so there is no original
hyperlink back to my blog.
seqinr
package - original
/ updated