Last updated: 2021-04-26
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Knit directory: toxin_dose_responses/
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| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | b1d3b74 | sam-widmayer | 2021-04-26 | fix chlorpyrifos |
| html | 8529055 | sam-widmayer | 2021-04-19 | Build site. |
| Rmd | 26547e8 | sam-widmayer | 2021-04-19 | integrate toxin27A |
| html | bc5c5b5 | sam-widmayer | 2021-04-09 | Build site. |
| Rmd | ea23ad6 | sam-widmayer | 2021-04-09 | toxin26A and tx group analyses |
| Rmd | 5cdca37 | sam-widmayer | 2021-04-09 | toxin26A and tx group analyses |
| html | 1f8d045 | sam-widmayer | 2021-04-07 | Build site. |
| Rmd | 59b9a05 | sam-widmayer | 2021-04-07 | explicit DRC plotting |
| html | 0a1d24d | sam-widmayer | 2021-04-07 | Build site. |
| Rmd | 0cc26e9 | sam-widmayer | 2021-04-07 | require ggbeeswarm |
| Rmd | d4ed1ff | sam-widmayer | 2021-04-07 | tx-specific cleaning and plotting of DRCs |
| html | 19f2802 | sam-widmayer | 2021-03-29 | Build site. |
| Rmd | 3720d88 | sam-widmayer | 2021-03-29 | integrate toxin24A |
| Rmd | 736d501 | sam-widmayer | 2021-03-29 | integrate toxin24A |
| Rmd | ecf1af1 | sam-widmayer | 2021-03-29 | integrate toxin24A |
| html | 0e83f2b | sam-widmayer | 2021-03-24 | Build site. |
| Rmd | 7d105e2 | sam-widmayer | 2021-03-24 | progress meeting updates |
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| Rmd | f2b09cd | sam-widmayer | 2021-03-23 | EC plot and DRC evaluation updates |
| Rmd | 07d524b | sam-widmayer | 2021-03-23 | EC plot and DRC evaluation updates |
| html | deb1df5 | sam-widmayer | 2021-03-21 | Build site. |
| Rmd | 32ad79a | sam-widmayer | 2021-03-21 | heatmap outputs |
| Rmd | 7ccc7de | sam-widmayer | 2021-03-21 | heatmap outputs |
| Rmd | 01b3361 | sam-widmayer | 2021-03-21 | heatmap outputs |
| Rmd | 7eb07f1 | sam-widmayer | 2021-03-21 | toxin23 updates and Worm_Length filter for MDHD data |
| html | 7ae886c | sam-widmayer | 2021-03-14 | Build site. |
| Rmd | 3f4a99b | sam-widmayer | 2021-03-14 | integrate toxin22 results |
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| html | cb6e132 | sam-widmayer | 2021-03-06 | Build site. |
| Rmd | 46c9647 | sam-widmayer | 2021-03-06 | static working directory |
| Rmd | 41bdaa0 | sam-widmayer | 2021-03-05 | dynamic working directory |
| Rmd | 0c9d312 | sam-widmayer | 2021-03-05 | initiate toxin DRC analysis repo |


Metadata_Experiment bleach median cv.censor
1 toxin09A 1 0.3836145 0
2 toxin10A 1 0.4305145 0
3 toxin11A 1 0.4277093 0
4 toxin14A 1 0.3309190 0
5 toxin14A 2 0.6202207 1
6 toxin14A 3 0.3139512 0
7 toxin14B 1 0.3531075 0
8 toxin14B 2 0.6821373 1
9 toxin14B 3 0.4144394 0
10 toxin15A 1 0.3776043 0
11 toxin15A 2 0.3237794 0
12 toxin15A 3 0.5858180 1
13 toxin15B 1 0.3014705 0
14 toxin15B 2 0.3782805 0
15 toxin15B 3 0.5791055 1
16 toxin16A 1 0.3024091 0
17 toxin16A 2 0.6394078 1
18 toxin16A 3 0.6430524 1
19 toxin17A 1 0.3203867 0
20 toxin17A 2 0.5750981 1
21 toxin17A 3 0.3401813 0
22 toxin18A 1 0.3202607 0
23 toxin18A 2 0.3228881 0
24 toxin18A 3 0.3338709 0
25 toxin19A 1 0.3333869 0
26 toxin19A 2 0.3179010 0
27 toxin19A 3 0.3330344 0
28 toxin22A 1 0.2625332 0
29 toxin22A 2 0.2967801 0
30 toxin22A 3 0.2706957 0
31 toxin23A 1 0.3243216 0
32 toxin23A 2 0.3411546 0
33 toxin23A 3 0.2809086 0
34 toxin24A 1 0.2672445 0
35 toxin24A 2 0.3018825 0
36 toxin24A 3 0.3152494 0
37 toxin25A 1 0.3024884 0
38 toxin25A 2 0.2940015 0
39 toxin25A 3 0.3507315 0
40 toxin26A 1 0.3178134 0
41 toxin26A 2 0.2864734 0
42 toxin26A 3 0.2638100 0
43 toxin27 1 0.3471797 0
44 toxin27 2 0.3083537 0
45 toxin27 3 0.3159872 0
Df Sum Sq Mean Sq F value Pr(>F)
assay 16 2.5484 0.15928 19.149 < 2e-16 ***
as.factor(bleach) 2 0.4302 0.21509 25.859 4.3e-11 ***
strain 7 0.0979 0.01399 1.682 0.113
assay:as.factor(bleach) 26 2.0940 0.08054 9.683 < 2e-16 ***
Residuals 302 2.5120 0.00832
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1



























| Version | Author | Date |
|---|---|---|
| 8529055 | sam-widmayer | 2021-04-19 |
| bc5c5b5 | sam-widmayer | 2021-04-09 |
| 1f8d045 | sam-widmayer | 2021-04-07 |
| 0a1d24d | sam-widmayer | 2021-04-07 |
| 0e83f2b | sam-widmayer | 2021-03-24 |
| 02a633e | sam-widmayer | 2021-03-24 |
| deb1df5 | sam-widmayer | 2021-03-21 |
| 7ae886c | sam-widmayer | 2021-03-14 |
| cb6e132 | sam-widmayer | 2021-03-06 |


















[1] "Excluding toxin17A: No Response"



%20nitrate-1.png)
%20nitrate-2.png)
%20nitrate-3.png)
[1] "Excluding toxin16A: Inaccurate Dilution Series"














Error in optim(startVec, opfct, hessian = TRUE, method = optMethod, control = list(maxit = maxIt, :
non-finite finite-difference value [3]
[1] "Unable to optimize model"
[1] "Unable to optimize model"












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Table: Aldicarb Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------ ------------- ------------
ECA396 106.19±5.26 119.39±5.14 119.57±4.9
CB4856 116.25±6.36 130.8±6.3 131.19±6.01
ECA36 126.87±6.17 140.64±5.88 140.81±5.66
MY16 75.21±5.64 81.46±5.03 81.67±4.79
XZ1516 135.86±7.41 151.55±7.85 151.44±7.6
RC301 85.86±5.27 95.23±4.71 95.06±4.47
PD1074 93.82±4.98 105.8±4.46 106.36±4.24
ECA248 100.48±6.92 112.59±6.84 112.72±6.51
Table: Aldicarb Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
ECA396 327.15±16.51 333.81±16.72 345.67±18.98
CB4856 356.74±13.9 351.65±15.96 352.61±16.21
ECA36 369.01±11.06 361.71±11.99 363.81±12.03
MY16 230.52±13.76 237.66±16.61 244.01±17.83
XZ1516 357.46±13.56 353.74±13.9 352.49±14.11
RC301 272.07±12.99 282.15±13.56 288.18±15.05
PD1074 275.54±9.11 272.47±8.39 271.38±8.35
ECA248 328.04±18.04 337.15±24.07 341.44±27.43
Table: Aldicarb Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- --------------- ---------------
ECA396 670.14±56.57 933.29±98.86 999.34±112
CB4856 728.94±44.97 945.42±91.73 947.75±90.13
ECA36 728.66±35.77 930.24±69.6 939.98±68.16
MY16 470.65±47.59 693.4±97.41 729.07±106.04
XZ1516 662.17±41.04 825.65±73.37 820.45±70.74
RC301 567.42±50.45 835.93±88.46 873.63±97.8
PD1074 547.47±34.62 701.69±48.32 692.39±46.14
ECA248 697.25±61.12 1009.58±148.13 1034.22±167.11
Table: Arsenic trioxide Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- ------------- --------------
PD1074 424.78±310.18 852.9±932.35 639.16±201.42
Table: Atrazine Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- --------------- --------------
ECA248 231.03±45.22 305.76±96.3 610.18±710.96
PD1074 323.78±159.61 430.95±237.65 NA
XZ1516 259.56±83.83 338.98±134.82 604.71±670.12
RC301 180.06±17.9 221.04±30.53 279.45±92.4
CB4856 302.15±214.96 452.74±379.63 NA
ECA36 551.13±889.49 832.27±1429.92 NA
ECA396 259.49±90.99 400.28±199.19 NA
Table: Atrazine Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- -------------- ----------
ECA248 740.46±247.7 NA NA
XZ1516 914.35±412.62 NA NA
RC301 603.8±106.15 824.22±223.15 NA
Table: Cadmium dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- -----------
ECA396 44.61±1.62 45.17±1.34 45.25±1.21
PD1074 40.58±1.09 42.3±0.91 43.03±0.86
ECA248 41.58±2.72 42.68±2.16 43±2.04
XZ1516 42.46±1.67 43.68±1.43 44.02±1.33
RC301 39.74±1.3 41.96±1.11 43±1.05
ECA36 56.75±2.95 56.22±2.52 54.92±2.14
CB4856 31.65±1.27 34.06±1.18 34.59±1.21
MY16 38±1.42 40.02±1.23 40.81±1.18
Table: Cadmium dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- -----------
ECA396 80.61±1.26 77.97±1.52 76.84±1.41
PD1074 76.37±0.95 73.61±1.12 72.81±1.02
ECA248 74.03±2.84 69.62±3.24 69.44±2.84
XZ1516 82.17±1.34 81.38±1.79 80.01±1.72
RC301 76.81±1.11 74.78±1.34 73.82±1.23
ECA36 92.47±1.25 92.17±1.56 91.03±1.69
CB4856 74.38±1.49 75.52±2.3 74.46±2.33
MY16 77.51±1.31 76.32±1.7 75.09±1.58
Table: Cadmium dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------ ------------- -------------
ECA396 117.55±2.34 134.59±4.95 130.49±4.48
PD1074 114.26±1.87 128.07±3.88 123.22±3.33
ECA248 106.93±5.16 113.57±9.82 112.13±8.38
XZ1516 125.15±2.98 151.61±7.11 145.41±6.64
RC301 116.91±2.31 133.27±4.97 126.72±4.19
ECA36 126.23±3.34 151.12±7.33 150.88±7.04
CB4856 128.23±4.05 167.48±11.48 160.28±11.54
MY16 122.09±2.92 145.57±6.87 138.18±6.06
Table: Carbaryl Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- --------------
RC301 153.86±13.45 206.66±31.25 318.49±148.7
MY16 115.77±4.5 131.85±4.29 135.52±4.16
XZ1516 138.51±5.63 160.03±6.16 167.91±8.08
ECA248 215.06±13.53 263.15±26.42 350.16±107.75
CB4856 200.77±7.47 224.45±7.79 232.64±9.74
ECA396 118.25±6.19 134.47±5.88 138.17±5.63
ECA36 282.12±38.73 391.53±85.12 NA
Table: Carbaryl Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- -------------- -------------
RC301 560.72±88.19 899.1±242.48 NA
MY16 329.43±10.08 372.72±19.75 377.73±25.18
XZ1516 396.9±19.22 480.15±41.68 527.38±71.69
ECA248 599.91±67.03 828.28±158.41 NA
CB4856 477.83±21.16 543.72±40.07 589.88±68.61
ECA396 334.69±14.2 365.03±24.39 365.57±28.19
ECA36 823.29±165.63 NA NA
Table: Carbaryl Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -----------
MY16 641.47±34.4 NA NA
XZ1516 776.32±60.67 NA NA
CB4856 830.35±58.18 NA NA
ECA396 649.51±47.04 990.92±136.9 967.21±149
Table: Carboxin Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
RC301 245.37±13.69 268.12±13.33 271.54±13.17
MY16 208.99±11.87 232.92±11.41 236.38±11.06
XZ1516 246.6±16.77 281.8±17.27 286.26±17.03
PD1074 294.44±24.48 321.2±23.59 326.03±23.43
ECA248 264.83±20 294.25±19.9 298.93±19.58
CB4856 218.08±16.13 242.89±15.96 246.14±15.48
ECA396 270.53±11.22 295.77±10.69 298.53±10.38
ECA36 343.43±23.11 376.82±22.71 382.09±22.25
Table: Carboxin Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
RC301 518.27±12.99 520.48±15.19 514.66±14.85
MY16 542.31±16.17 559.04±22.25 551.86±22.67
XZ1516 634.1±24.55 652.59±34.08 647.19±35.34
PD1074 762.58±35.12 837.75±72.34 829.67±86.63
ECA248 653.85±27.45 672.27±39.66 662.19±40.07
CB4856 567.38±22.5 585.55±31.62 575.34±31.85
ECA396 543.23±11.13 538.19±12.02 534.45±11.71
ECA36 721.61±27.71 712.59±33.79 705.55±31.94
Table: Carboxin Estimates
Strain Weibull Log-Logistic Lognormal
------- --------------- --------------- ---------------
RC301 834.65±39.4 1010.37±74.89 975.44±68.53
MY16 995.79±54.82 1341.73±127.72 1288.38±122.31
XZ1516 1157.57±81.68 1511.25±193.26 1463.19±189.76
PD1074 1398.49±106.11 NA NA
ECA248 1163.1±82.92 1535.93±209.95 1466.89±201.43
CB4856 1043.54±72.96 1411.64±179.5 1344.81±169.67
ECA396 847.09±31.39 979.33±52.28 956.83±47.61
ECA36 1158.26±71.01 1347.56±144.72 1302.84±129.29
Table: Chlorfenapyr Estimates
Strain Weibull Log-Logistic Lognormal
------- ---------- ------------- ----------
ECA248 0.17±0.01 0.18±0.01 0.19±0.01
XZ1516 0.3±0.01 0.32±0.01 0.32±0.01
CB4856 0.27±0.01 0.27±0.01 0.27±0.01
ECA396 0.47±0.01 0.51±0.01 0.52±0.01
PD1074 0.33±0.01 0.33±0.01 0.33±0.01
RC301 0.2±0.01 0.21±0.01 0.21±0.01
MY16 0.19±0.01 0.21±0.01 0.21±0.01
ECA36 NA 0.99±0.02 1.01±0.02
Table: Chlorfenapyr Estimates
Strain Weibull Log-Logistic Lognormal
------- ---------- ------------- ----------
ECA248 0.48±0.02 0.47±0.03 0.47±0.02
XZ1516 0.65±0.01 0.65±0.01 0.65±0.01
CB4856 0.54±0.01 0.55±0.01 0.54±0.01
ECA396 0.78±0.02 0.73±0.02 0.74±0.02
PD1074 0.59±0 0.6±0.01 0.6±0.01
RC301 0.46±0.01 0.45±0.01 0.45±0.01
MY16 0.47±0.01 0.47±0.02 0.47±0.02
ECA36 NA 1.49±0.03 1.5±0.03
Table: Chlorfenapyr Estimates
Strain Weibull Log-Logistic Lognormal
------- ---------- ------------- ----------
ECA248 0.91±0.06 1.21±0.13 1.17±0.12
XZ1516 1.08±0.04 1.32±0.06 1.32±0.06
CB4856 0.85±0.02 1.09±0.05 1.07±0.05
ECA396 1.08±0.04 1.04±0.06 1.06±0.06
PD1074 0.85±0.02 1.09±0.03 1.12±0.03
RC301 0.8±0.02 0.99±0.05 0.95±0.04
MY16 0.84±0.03 1.08±0.07 1.04±0.07
ECA36 NA 2.24±0.13 2.21±0.12
Table: Chlorothalonil Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- ------------- ------------
PD1074 33.57±17.14 58.34±45.23 NA
ECA36 27.12±6.11 38.09±16.06 64.47±98.41
ECA396 38.24±7.05 51.8±15.79 80.42±68.34
RC301 164.03±519.98 NA NA
XZ1516 49.13±6 55.59±6.36 58.19±9.26
Table: Chlorothalonil Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- -------------- -------------
PD1074 208.51±159.34 NA NA
ECA36 124.4±52.06 223.48±182.07 NA
ECA396 155.5±52.26 NA NA
XZ1516 127.54±16.01 153.29±37.18 174.57±75.71
Table: Chlorothalonil Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- ----------
XZ1516 234.24±48.59 NA NA
Table: Chlorpyrifos Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------ ------------- ------------
MY16 15.55±39.17 NA NA
XZ1516 2.72±0.14 3.2±0.18 3.53±0.37
PD1074 2.71±4.57 8.49±13.73 NA
ECA248 2.06±0.98 3.57±2.32 12.24±14.97
CB4856 3.88±3.06 10.87±10.59 NA
ECA396 3.79±6.17 10.36±20.26 NA
ECA36 1.81±0.11 2.27±0.18 2.67±0.41
Table: Chlorpyrifos Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------ ------------- -----------
XZ1516 8.19±0.61 10.39±1.32 13.29±3.38
ECA248 17.87±12.12 NA NA
ECA36 7.39±0.76 10.32±1.69 14.8±4.74
Table: Chlorpyrifos Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- ----------
XZ1516 16.56±1.87 NA NA
ECA36 18.1±2.6 NA NA
Table: Copper(II) chloride Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- ------------- --------------
ECA396 194.74±363.28 92.74±33.02 NA
RC301 73±27.52 71.63±14.72 139.84±145.92
XZ1516 NA 85.39±15.19 176.86±231.79
ECA36 NA 77.33±12.84 NA
Table: Copper(II) chloride Estimates
Strain Weibull Log-Logistic Lognormal
------- -------- ------------- ----------
XZ1516 NA 174.26±73.71 NA
ECA36 NA 191.02±62.66 NA
Table: Deltamethrin Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
PD1074 7.11±14.99 3.81±4.91 6.41±3.89
CB4856 12±22.65 3.23±5.33 5.89±92.06
ECA36 0±0 NA NA
MY16 0.04±0.14 0.3±0.82 0.58±1.41
ECA396 109.16±50.32 189.52±53.16 181.17±52.24
RC301 0.07±0.67 0.21±1.32 0.36±2.16
ECA248 60.49±42.57 123.1±72.03 124.52±64.1
Table: Deltamethrin Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- ------------- ---------------
PD1074 190.35±82.26 NA NA
CB4856 189.16±89.58 NA 358.39±7874.89
ECA36 312.51±371.25 NA NA
ECA396 321.36±48.41 346.57±36.96 339.09±40.27
ECA248 299.22±72.2 327.1±64.14 321.01±65.33
Table: Deltamethrin Estimates
Strain Weibull Log-Logistic Lognormal
------- ---------------- -------------- --------------
PD1074 1545.97±1657.16 NA NA
CB4856 1096.39±762.04 NA NA
ECA396 639.45±75.14 633.76±89.72 634.65±80.23
ECA248 828.81±173.64 869.21±308.86 827.55±221.72
Table: Lead(II) nitrate Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- ------------- ----------
ECA36 233.52±141.68 556.99±619.9 NA
Table: Malathion Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
PD1074 45.51±6.77 57.45±6.86 59.82±6.58
CB4856 53.44±10.27 69.52±10.23 71.49±9.68
ECA36 144.25±29.96 162.69±28.87 165.54±27.47
MY16 44.86±11.2 57.31±10.42 59.12±9.96
ECA396 50.88±8.05 64.94±7.9 66.82±7.51
RC301 28.89±5.36 39.04±5.57 41.15±5.42
XZ1516 38.86±8.37 55.78±9.44 59.25±9.14
ECA248 23.77±8.28 31.98±8.98 34.06±8.86
Table: Malathion Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
PD1074 212.64±11.79 209.96±12.66 205.85±12.07
CB4856 214.78±16.36 206.84±15.68 205±15.25
ECA36 509.7±58.68 498.17±69.04 488.36±65.31
MY16 168±15.35 162.1±14.76 161.28±14.4
ECA396 186.97±11.89 179.21±11.37 178.46±11.07
RC301 146.15±8.67 144.83±8.77 142.32±8.43
XZ1516 311.26±34.26 321.37±45.01 316.38±43.87
ECA248 130.96±14.4 131.38±14.91 128.51±14.3
Table: Malathion Estimates
Strain Weibull Log-Logistic Lognormal
------- --------------- --------------- ---------------
PD1074 567.95±59.77 767.36±118.2 708.3±97.74
CB4856 521.19±76.02 615.37±110.72 587.83±94.47
ECA36 1139.38±216.23 1525.45±457.68 1440.71±398.95
MY16 389.73±72.09 458.49±101.91 439.92±88.98
ECA396 428.52±51.38 494.59±76.13 476.65±65.98
RC301 410.64±47.37 537.32±87.13 492.15±70.62
XZ1516 1172.25±262.67 1851.59±657.9 1689.37±563.88
ECA248 388.54±79.09 539.63±169.34 484.91±134.31
Table: Mancozeb Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- ------------
MY16 61.82±3.44 66.73±3.24 67.14±3.12
ECA248 48.21±2.77 53.49±2.63 54.68±2.67
RC301 32.32±1.71 38.43±1.89 40.94±2.67
ECA36 42.69±2.11 50.77±2.99 56.35±6.51
ECA396 38.99±1.79 45.71±2.06 49.18±3.59
PD1074 36.54±1.53 42.41±1.57 44.58±2.06
XZ1516 55.45±4.04 65.29±6.48 75.06±17.81
CB4856 39.16±1.8 45.96±2.14 49.28±3.55
Table: Mancozeb Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
MY16 121.18±4.48 124.68±6.69 124.98±7.63
ECA248 117.1±5.34 133.33±11.64 138.31±17.34
RC301 108.59±7.26 134.82±16.39 151.82±29.81
ECA36 127.62±9.44 166.77±23.49 211.34±60.11
ECA396 116.7±6.91 145.74±16.3 172.65±35.78
PD1074 109.37±4.85 133.05±11.36 147.88±20.8
XZ1516 149.32±19.64 190.01±43.22 NA
CB4856 118.08±7 148.31±16.61 173.06±34.47
Table: Mancozeb Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
MY16 186.09±11.69 232.95±27.2 232.66±30.08
ECA248 206.16±16.05 NA NA
RC301 235.1±25.86 NA NA
ECA396 234.71±22.7 NA NA
PD1074 219.96±16.52 NA NA
CB4856 238.59±22.81 NA NA
Table: Manganese dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- -------------- --------------
RC301 1106.27±89.77 1155.82±75.57 1257.7±452.37
Table: Manganese dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- --------------- ----------
RC301 1542.86±96.38 1712.49±326.76 NA
Table: Manganese dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- --------------- ------------- ----------
RC301 1907.17±232.44 NA NA
Table: Methomyl Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- -----------
ECA396 10.13±0.51 11.46±0.51 11.67±0.51
CB4856 12.36±0.67 13.55±0.64 13.62±0.63
ECA36 10.35±0.51 11.69±0.47 11.81±0.47
MY16 9.42±0.51 10.88±0.52 11.12±0.53
XZ1516 10.29±0.53 11.5±0.5 11.6±0.48
RC301 9.5±0.53 10.65±0.5 10.72±0.47
PD1074 8.61±0.33 9.77±0.33 9.92±0.32
ECA248 10.02±1.11 11.57±1.15 11.67±1.12
Table: Methomyl Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- -----------
ECA396 34.1±1.43 38.27±2.72 40.35±3.9
CB4856 34.56±1.23 35.23±1.79 35.04±1.85
ECA36 34.82±0.95 35.57±1.13 35.28±1.15
MY16 35.69±1.76 41.65±3.22 44.99±4.84
XZ1516 32.94±1.09 35.01±1.71 35.21±1.93
RC301 31.46±1.13 33.64±1.75 34.1±2.02
PD1074 28.11±0.88 29.88±1.33 30.14±1.56
ECA248 39.44±3.36 41.27±4.32 41.05±4.58
Table: Methomyl Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------ ------------- -------------
ECA396 73.91±4.84 127.78±17.44 139.52±25.23
CB4856 66.54±3.61 91.63±9.6 90.15±9.74
ECA36 75.44±3.88 108.17±8.05 105.4±7.87
MY16 83.41±6.72 159.46±23.7 181.98±36.26
XZ1516 69.13±3.77 106.57±11.01 106.87±12.18
RC301 67.5±4.15 106.27±11.93 108.45±13.43
PD1074 59.76±2.96 91.36±8.37 91.54±9.54
ECA248 94.45±13.39 147.19±32.44 144.43±33.21
Table: Methylmercury dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ---------- ------------- ----------
ECA396 2.3±0.22 2.78±0.24 2.88±0.25
CB4856 1.66±0.2 2.11±0.23 2.24±0.25
ECA36 2.38±0.21 2.84±0.24 2.97±0.25
MY16 1.72±0.28 2.07±0.3 2.14±0.31
XZ1516 3.52±0.35 4.04±0.38 4.13±0.39
RC301 2.64±0.3 3.52±0.47 4.11±0.88
PD1074 2.32±0.23 3.16±0.37 3.79±0.75
ECA248 1.22±0.24 1.76±0.49 2.39±1.45
Table: Methylmercury dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- ------------
ECA396 15.73±1.97 18.51±2.76 19.88±3.51
CB4856 14.2±2.23 17.82±3.71 19.28±4.96
ECA36 21.1±2.16 25.08±3.6 28.27±5.14
MY16 12.71±2.86 15.13±3.63 16.43±4.63
XZ1516 22.61±2.39 26.51±4 28.86±5.53
RC301 19.74±3.18 30.25±7.95 44.17±21.49
PD1074 19.52±2.85 30.81±7.35 47.7±21.41
ECA248 10.61±3.63 18.76±10.88 36.23±46.04
Table: Methylmercury dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------ -------------- -------------
ECA396 53.59±9.52 123.29±32.58 137.08±42.7
CB4856 55.77±12.9 150.16±56.21 166.17±76.09
ECA36 84.74±12.2 221.88±55.19 NA
MY16 45.4±14.59 110.74±47.08 126.01±63.06
XZ1516 73.95±10.99 173.68±45.6 201.5±67.63
RC301 71.1±16.11 NA NA
PD1074 75.95±15.93 NA NA
ECA248 42.13±20.59 199.52±184.63 NA
Table: Nickel dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- -----------
ECA396 49.7±2.61 50.33±2.22 50.28±1.96
CB4856 49.71±2.86 50.28±2.4 50.43±2.09
ECA36 52.92±2.95 57.57±2.02 59.8±2.85
MY16 42.6±2.83 45.4±2.33 45.84±2.14
PD1074 62.34±4.45 63.61±3.87 62.17±3.09
Table: Nickel dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------ ------------- -------------
ECA396 86.77±1.57 85.7±1.93 84.36±1.9
CB4856 84.76±1.81 82.79±2.13 81.59±2.04
ECA36 110.04±4.75 127.77±12.22 143.71±26.28
MY16 93.5±2.79 102.13±6.2 103.29±8.48
PD1074 103.72±1.97 107.44±4.11 109.84±5.83
Table: Nickel dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- ------------
ECA396 123.76±3.33 145.93±7.24 141.52±6.56
CB4856 119.1±3.35 136.32±6.84 132±6.04
ECA36 175.46±16.36 NA NA
MY16 154.31±9.69 NA NA
PD1074 143.47±8.58 181.45±22.12 194.08±26.6
Table: Paraquat Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- -----------
MY16 42.51±3.9 41.18±3.32 39.89±2.91
XZ1516 49.37±4.99 57.65±4.75 59.04±4.48
CB4856 40.38±3.35 40.62±2.9 39.46±2.7
RC301 15.69±1.75 22.62±1.85 22.84±1.66
PD1074 29.15±2.86 28.51±2.26 27.44±2.12
ECA248 29.11±3.68 28.73±2.32 28.45±2.28
ECA36 56.24±4.19 46.32±3.49 45.9±3.55
ECA396 15±1.59 21.65±1.64 21.82±1.5
Table: Paraquat Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
MY16 126.27±7.03 143.14±10.59 157.95±12.48
XZ1516 314.52±29.47 291.05±33.65 302.29±34.18
CB4856 127.35±6.29 138.36±8.69 149.29±10.9
RC301 132.47±13.53 113.76±9.99 124.26±10.77
PD1074 99.37±4.54 110.12±6.65 118.23±8.92
ECA248 86.06±4.61 94.06±5.71 97.15±6.63
ECA36 105.31±2.6 112.07±5.17 114.49±6.19
ECA396 126±11.04 108.5±7.86 116.76±8.2
Table: Paraquat Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- -------------- ---------------
MY16 252.72±28.75 497.57±94.41 625.46±116.71
XZ1516 1023.66±146.7 1469.48±325.3 1547.64±331.52
CB4856 264.81±25.8 471.32±74.8 564.83±99.15
RC301 515.82±96.76 572.24±118.93 676.16±128.82
PD1074 217.13±22.2 425.4±69.17 509.35±97.36
ECA248 171.73±23.93 307.92±49.24 331.75±57.85
ECA36 157.05±6.09 271.17±37.15 285.56±44.67
ECA396 489.11±80.73 543.61±93.74 624.93±97.74
Table: Propoxur Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
PD1074 139.03±18.01 163.56±18.37 168.19±17.24
CB4856 306.59±38.9 337.07±38.47 330.61±36.12
ECA36 177.69±18.36 213.02±20.24 215.77±19.37
MY16 209.83±21.73 235.56±21.35 234.44±20.62
ECA396 181.55±22.27 205.9±21.58 206.61±20.44
RC301 149.5±18.22 175.21±18.37 177.84±17.26
XZ1516 168.96±20.27 196.66±20.06 199.57±19.05
ECA248 345.83±48.11 377.28±48.27 371.86±46.55
Table: Propoxur Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- -------------
PD1074 507.2±32.05 474.33±33.55 463.49±30.85
CB4856 640.81±36.36 617.73±36.65 611.81±36.47
ECA36 562.03±25.81 539.36±26.42 529.81±25.48
MY16 490.58±22.83 476.38±22.67 472.74±22.58
ECA396 513.2±29.92 499.16±30.64 494.62±30.05
RC301 515.93±31.38 496.85±32.65 488.66±31.07
XZ1516 516.57±28.84 496.43±29.57 489.66±28.31
ECA248 731.47±51.87 680.89±51.51 676.26±50.26
Table: Propoxur Estimates
Strain Weibull Log-Logistic Lognormal
------- --------------- --------------- ---------------
PD1074 1157.11±103.34 1375.59±195.27 1277.26±155.68
CB4856 1025.11±90.62 1132.07±128.17 1132.19±120.96
ECA36 1170.74±84.24 1365.66±145.62 1300.89±121.34
MY16 842.9±68.48 963.42±99.02 953.26±92.4
ECA396 995.14±103.57 1210.07±167.62 1184.13±151.82
RC301 1136.08±117.22 1408.92±205.86 1342.77±175.9
XZ1516 1053.03±97.95 1253.1±161.23 1201.44±138.63
ECA248 1179.02±107.91 1228.82±156.49 1229.84±140.84
Table: Pyraclostrobin Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- -----------
ECA248 8.25±1.62 10.95±1.92 11.53±1.98
XZ1516 11.15±1.12 14.35±1.31 14.97±1.33
ECA36 11.06±0.76 14.43±0.85 15±0.87
CB4856 11.78±1.14 14.95±1.29 15.49±1.3
ECA396 6.98±0.66 8.7±0.72 8.98±0.73
PD1074 12.2±0.8 15.36±0.88 15.75±0.88
RC301 17.27±1.74 21.02±1.82 21.31±1.77
MY16 6.79±0.72 8.95±0.84 9.32±0.84
Table: Pyraclostrobin Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------ ------------- -------------
ECA248 92.17±10.54 104.78±18.2 101.26±18.97
XZ1516 91.26±5.11 94.23±6.91 90.66±6.61
ECA36 78.65±2.91 79.02±3.32 77.35±3.25
CB4856 100.63±6.04 107.88±9 104.37±9.07
ECA396 47.84±3.17 53.28±4.72 52.99±5.13
PD1074 98.62±3.93 105.55±5.59 103.59±5.85
RC301 94.25±5.42 93.51±5.98 92.03±5.82
MY16 76.77±5.29 84.97±8.22 82.82±8.56
Table: Pyraclostrobin Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- --------------- --------------
ECA248 429.08±85.66 1002.86±401.98 889.07±378.1
XZ1516 348.49±32.94 618.76±105.63 548.97±90.54
ECA36 274.59±18.9 432.59±44.76 399.02±39.81
CB4856 394.82±39.31 778.18±144.07 703±133.32
ECA396 163.08±19.05 326.44±64.19 312.77±65.53
PD1074 373.52±26.41 725.34±88.28 681.17±86.1
RC301 277.93±28.44 415.98±60.75 397.5±55.34
MY16 360.29±42.25 806.45±173.01 736.31±164.86
Table: Silver nitrate Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- -------------- ------------
MY16 2.37±0.83 5.25±2.47 21.18±23.07
XZ1516 7.5±0.66 11.07±1.35 15.74±4.39
PD1074 10.7±6 21.37±11.8 49.81±28.69
ECA36 8±1.81 14.88±4.83 43.91±45.06
ECA396 186.42±376.49 115.8±98.12 NA
ECA248 29.17±41.39 124.94±297.31 NA
CB4856 20.11±21.71 62.9±86.24 NA
Table: Silver nitrate Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- ----------
MY16 113.35±62.49 NA NA
XZ1516 77.92±11.69 142.21±35.39 NA
ECA36 133.58±47.85 NA NA
Table: Triphenyl phosphate Estimates
Strain Weibull Log-Logistic Lognormal
------- ---------- ------------- ----------
MY16 0.51±0.06 0.69±0.07 0.73±0.07
XZ1516 3.96±0.38 4.64±0.43 4.83±0.45
PD1074 3.15±0.23 3.71±0.26 3.83±0.26
ECA36 2.08±0.19 2.5±0.21 2.57±0.21
ECA396 1.21±0.11 1.56±0.12 1.61±0.12
RC301 1.63±0.16 1.98±0.17 2.04±0.18
ECA248 1.09±0.13 1.42±0.15 1.48±0.15
CB4856 2.12±0.16 2.58±0.19 2.69±0.2
Table: Triphenyl phosphate Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- -----------
MY16 7.86±0.55 9.06±0.94 8.78±0.99
XZ1516 18.18±0.79 18.86±1.08 18.18±1.03
PD1074 17.14±0.59 17.75±0.83 17.04±0.8
ECA36 14.57±0.66 15.46±0.98 14.88±0.98
ECA396 10.98±0.72 11.96±1.06 11.95±1.14
RC301 12.42±0.56 13.74±0.92 13.25±0.96
ECA248 11.83±0.86 13.42±1.45 13.13±1.56
CB4856 14.81±0.57 15.82±0.88 15.05±0.86
Table: Triphenyl phosphate Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- ------------- -------------
MY16 45.07±5.51 118.49±27.67 106.14±25.88
XZ1516 48.03±3.63 76.67±11.25 68.4±9.77
PD1074 50.48±2.97 84.99±9.62 75.88±8.36
ECA36 50.32±4.03 95.49±14.37 86.16±13.11
ECA396 44.69±4.96 91.82±17.4 88.52±17.75
RC301 45.24±3.87 95.41±15.83 85.95±15.11
ECA248 54.06±6.84 126.55±30.78 116.62±30.47
CB4856 51.04±3.33 96.79±12.88 84.11±11.24
Table: 2,4-D Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- -------------- --------------
ECA36 661.67±277.36 855.73±700.98 NA
ECA396 454.43±58.54 556.58±115.07 828.48±460.04
ECA248 528.95±24.63 548.81±22.62 551.77±23.98
Table: 2,4-D Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- ------------- ------------
ECA396 919.06±187.06 NA NA
ECA248 742.76±28.96 781.14±54.45 798.2±82.54
Table: 2,4-D Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- ----------
ECA248 922.16±59.27 NA NA
Table: Zinc dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ----------- -------------- -------------
MY16 57.69±3.44 74.32±7.34 106.98±36.76
XZ1516 52.17±3.36 60.97±3.78 64.58±5.5
PD1074 83.2±20.08 124.85±39.66 NA
ECA36 59.89±6.51 81.36±13.45 139.56±74.52
ECA396 35.17±1.72 41.38±1.72 43.24±2.03
RC301 49.1±3.08 59.8±4.33 69.49±11.07
ECA248 54±3.87 65.98±5.83 77.03±15.72
CB4856 84.1±48.67 159.15±117.29 NA
Table: Zinc dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- -------------- ------------- --------------
MY16 218.79±26.68 329.98±70.57 NA
XZ1516 176.88±12.79 220.01±28.75 256.95±59.3
PD1074 389.62±131.58 NA NA
ECA36 260.24±51.06 NA NA
ECA396 138.06±5.71 171.53±14.15 195.66±27.8
RC301 183.65±16.31 250.99±40.75 371.7±135.69
ECA248 194.95±22.08 266.78±54.37 388.69±182.27
Table: Zinc dichloride Estimates
Strain Weibull Log-Logistic Lognormal
------- ------------- ------------- ----------
XZ1516 385.12±45.4 NA NA
ECA396 330.04±23.73 NA NA
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drug
1 Aldicarb
2 Carbaryl
3 Methomyl
4 Propoxur

drug
1 Carboxin
2 Chlorothalonil
3 Mancozeb
4 Pyraclostrobin

drug
1 D-phenothrin
2 Deltamethrin
3 Permethrin

drug
1 Chlorpyrifos
2 Malathion
3 Parathion

drug
1 Arsenic trioxide
2 Cadmium dichloride
3 Copper(II) chloride
4 Lead(II) nitrate
5 Manganese dichloride
6 Methylmercury dichloride
7 Nickel dichloride
8 Silver nitrate
9 Zinc dichloride

drug
1 2,4-D
2 Atrazine
3 Paraquat

sessionInfo()
R version 4.0.4 (2021-02-15)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Catalina 10.15.7
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] ggrepel_0.9.1 ggbeeswarm_0.6.0 cowplot_1.1.1 RColorBrewer_1.1-2
[5] RCurl_1.98-1.2 ddpcr_1.15 kableExtra_1.3.4 knitr_1.31
[9] drc_3.0-1 MASS_7.3-53 easyXpress_0.1.0 forcats_0.5.1
[13] stringr_1.4.0 dplyr_1.0.4 purrr_0.3.4 readr_1.4.0
[17] tidyr_1.1.2 tibble_3.1.0 ggplot2_3.3.3 tidyverse_1.3.0
[21] workflowr_1.6.2
loaded via a namespace (and not attached):
[1] TH.data_1.0-10 colorspace_2.0-0 ellipsis_0.3.1
[4] rio_0.5.16 rprojroot_2.0.2 fs_1.5.0
[7] rstudioapi_0.13 farver_2.0.3 audio_0.1-7
[10] fansi_0.4.2 mvtnorm_1.1-1 lubridate_1.7.9.2
[13] xml2_1.3.2 codetools_0.2-18 splines_4.0.4
[16] readbitmap_0.1.5 jsonlite_1.7.2 broom_0.7.5
[19] dbplyr_2.1.0 png_0.1-7 compiler_4.0.4
[22] httr_1.4.2 backports_1.2.1 assertthat_0.2.1
[25] bmp_0.3 Matrix_1.3-2 cli_2.3.1
[28] beepr_1.3 later_1.1.0.1 htmltools_0.5.1.1
[31] tools_4.0.4 igraph_1.2.6 gtable_0.3.0
[34] glue_1.4.2 rebus.base_0.0-3 Rcpp_1.0.6
[37] carData_3.0-4 cellranger_1.1.0 jquerylib_0.1.3
[40] vctrs_0.3.6 svglite_2.0.0 xfun_0.21
[43] rebus.datetimes_0.0-1 openxlsx_4.2.3 rvest_0.3.6
[46] lifecycle_1.0.0 rebus.numbers_0.0-1 gtools_3.8.2
[49] zoo_1.8-8 scales_1.1.1 hms_1.0.0
[52] promises_1.2.0.1 sandwich_3.0-0 yaml_2.2.1
[55] curl_4.3 sass_0.3.1 stringi_1.5.3
[58] imager_0.42.7 highr_0.8 plotrix_3.8-1
[61] tiff_0.1-6 zip_2.1.1 bitops_1.0-6
[64] rlang_0.4.10 pkgconfig_2.0.3 systemfonts_1.0.1
[67] evaluate_0.14 lattice_0.20-41 labeling_0.4.2
[70] tidyselect_1.1.0 magrittr_2.0.1 R6_2.5.0
[73] generics_0.1.0 multcomp_1.4-16 DBI_1.1.1
[76] pillar_1.5.0 haven_2.3.1 whisker_0.4
[79] foreign_0.8-81 withr_2.4.1 rebus_0.1-3
[82] survival_3.2-7 abind_1.4-5 rebus.unicode_0.0-2
[85] modelr_0.1.8 crayon_1.4.1 car_3.0-10
[88] utf8_1.1.4 rmarkdown_2.7 jpeg_0.1-8.1
[91] grid_4.0.4 readxl_1.3.1 data.table_1.14.0
[94] git2r_0.28.0 reprex_1.0.0 digest_0.6.27
[97] webshot_0.5.2 httpuv_1.5.5 munsell_0.5.0
[100] beeswarm_0.2.3 viridisLite_0.3.0 vipor_0.4.5
[103] bslib_0.2.4