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  • Showing docs for version 3.7-0


    FractionInformativeReads

    The fraction of reads deemed informative over the entire cohort

    Category Annotation Modules

    VCF Field INFO (variant-level)

    Type BetaTestingAnnotation, ReducibleAnnotation

    Header definition line
  • INFO=<ID=FractionInformativeReads,Number=1,Type=Float,Description="The fraction of informative reads out of the total reads">

  • Overview

    The FractionInformativeReads annotation produces a single fraction for each site: sum(AD)/sum(DP). The sum in the numerator is over all the samples in the cohort and all the alleles in each sample. The sum in the denominator is over all the samples.

    Caveats

    Related annotations